Please use this identifier to cite or link to this item: http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/2067
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dc.contributor.authorHotta, Kinyaen_US
dc.contributor.authorRanganathan, Soumyaen_US
dc.contributor.authorLiu, Ruchuanen_US
dc.contributor.authorWu, Feien_US
dc.contributor.authorMachiyama, Hiroakien_US
dc.contributor.authorGao, Rongen_US
dc.contributor.authorHirata, Hiroakien_US
dc.contributor.authorSoni, Neeleshen_US
dc.contributor.authorOhe, Takashien_US
dc.contributor.authorHogue, Christopher W. V.en_US
dc.contributor.authorMADHUSUDHAN, M. S.en_US
dc.contributor.authorSawada, Yasuhiroen_US
dc.date.accessioned2019-02-25T09:04:43Z
dc.date.available2019-02-25T09:04:43Z
dc.date.issued2014-04en_US
dc.identifier.citationPLoS Computational Biology, 10(4),en_US
dc.identifier.issn1553-734Xen_US
dc.identifier.issn1553-7358en_US
dc.identifier.urihttp://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/2067-
dc.identifier.urihttps://doi.org/10.1371/journal.pcbi.1003532en_US
dc.description.abstractMechanical stretch-induced tyrosine phosphorylation in the proline-rich 306-residue substrate domain (CasSD) of p130Cas (or BCAR1) has eluded an experimentally validated structural understanding. Cellular p130Cas tyrosine phosphorylation is shown to function in areas without internal actomyosin contractility, sensing force at the leading edge of cell migration. Circular dichroism shows CasSD is intrinsically disordered with dominant polyproline type II conformations. Strongly conserved in placental mammals, the proline-rich sequence exhibits a pseudo-repeat unit with variation hotspots 2–9 residues before substrate tyrosine residues. Atomic-force microscopy pulling experiments show CasSD requires minimal extension force and exhibits infrequent, random regions of weak stability. Proteolysis, light scattering and ultracentrifugation results show that a monomeric intrinsically disordered form persists for CasSD in solution with an expanded hydrodynamic radius. All-atom 3D conformer sampling with the TraDES package yields ensembles in agreement with experiment when coil-biased sampling is used, matching the experimental radius of gyration. Increasing β-sampling propensities increases the number of prolate conformers. Combining the results, we conclude that CasSD has no stable compact structure and is unlikely to efficiently autoinhibit phosphorylation. Taking into consideration the structural propensity of CasSD and the fact that it is known to bind to LIM domains, we propose a model of how CasSD and LIM domain family of transcription factor proteins may function together to regulate phosphorylation of CasSD and effect machanosensing.en_US
dc.language.isoenen_US
dc.publisherPublic Library Scienceen_US
dc.subjectBiophysical Propertiesen_US
dc.subjectIntrinsically Disordereden_US
dc.subjectp130Casen_US
dc.subjectSubstrate Domainen_US
dc.subjectImplication in Mechanosensingen_US
dc.subjectMechanical stretching of cellsen_US
dc.subject2014en_US
dc.titleBiophysical Properties of Intrinsically Disordered p130Cas Substrate Domain Implication in Mechanosensingen_US
dc.typeArticleen_US
dc.contributor.departmentDept. of Biologyen_US
dc.identifier.sourcetitlePLoS Computational Biologyen_US
dc.publication.originofpublisherForeignen_US
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