Please use this identifier to cite or link to this item: http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/6967
Full metadata record
DC FieldValueLanguage
dc.contributor.advisorUDGAONKAR, JAYANTen_US
dc.contributor.authorGUPTA, NIKITAen_US
dc.date.accessioned2022-05-17T11:24:47Z-
dc.date.available2022-05-17T11:24:47Z-
dc.date.issued2022-05-
dc.identifier.citation35en_US
dc.identifier.urihttp://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/6967-
dc.description.abstractLiquid-liquid phase separation (LLPS) is the reversible demixing of a homogenous solution into a dilute phase and a dense phase composed of droplets. These droplets have become increasingly important in understanding cellular biochemistry as membrane-less organelles. Tau, an intrinsically disordered, microtubule-associated protein expressed in neurons, undergoes LLPS in vitro. In Alzheimer’s disease, hyperphosphorylated tau accumulates in ageing neurons as neurofibrillary tangles. Droplets of disease-associated mutants of tau and phosphorylated tau exhibit reduced dynamics with time, transitioning from a normal liquid state to a viscous gel. Interestingly, these droplets also increase the aggregation kinetics of tau. Dynamically arrested droplets are now considered relevant in many neurodegenerative diseases as crucibles for protein aggregation. They may offer an alternative pathway for the assembly of fibrils, non-exclusive from the established nucleation dependent polymerisation. Altered dynamics in droplets could be driven by tau adopting different conformations inside them, and these remain to be elucidated. We intend to use pulsed hydrogen/deuterium exchange mass spectrometry (HXMS) to characterise the structural conformations of full-length tau in vitro droplets. How these conformations change with droplet maturation will shed light on the role of LLPS in tau aggregation. In this study, we isolated full-length tau to ~95% purity and standardised the initiation of LLPS in conditions described previously. We show that a certain concentration of salt abolishes LLPS and requires the presence of a molecular crowder to induce droplet formation. Preliminary FRAP data reveals that droplets are dynamic in nature. Standardised experiments will help estimate the timescale of the exchange of tau molecules between the two phases for the design of HXMS studies.en_US
dc.description.sponsorshipKVPYen_US
dc.language.isoenen_US
dc.subjectBiophysicsen_US
dc.subjectBiologyen_US
dc.titleLiquid-Liquid Phase Separation of Alzheimer's Protein Tauen_US
dc.typeThesisen_US
dc.type.degreeBS-MSen_US
dc.contributor.departmentDept. of Biologyen_US
dc.contributor.registration20171218en_US
Appears in Collections:MS THESES

Files in This Item:
File Description SizeFormat 
NG_JBU_MSThesis_final.pdfComplete MS Thesis document2.04 MBAdobe PDFView/Open    Request a copy


Items in DSpace are protected by copyright, with all rights reserved, unless otherwise indicated.