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Inferring causal pathways among three or more variables from steady-state correlations in a homeostatic system

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dc.contributor.author Chawla, Suraj en_US
dc.contributor.author Pund, Anagha en_US
dc.contributor.author Vibishan, B. en_US
dc.contributor.author KULKARNI, SHUBHANKAR en_US
dc.contributor.author Diwekar, Manawa en_US
dc.contributor.author WATVE, MILIND en_US
dc.date.accessioned 2018-11-02T04:35:25Z
dc.date.available 2018-11-02T04:35:25Z
dc.date.issued 2018-10 en_US
dc.identifier.citation PLOS One Vol.13(10) en_US
dc.identifier.issn 1932-6203 en_US
dc.identifier.uri http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/1330
dc.identifier.uri https://doi.org/10.1371/journal.pone.0204755 en_US
dc.description.abstract Cross-sectional correlations between two variables have limited implications for causality. We examine here whether it is possible to make causal inferences from steady-state data in a homeostatic system with three or more inter-correlated variables. Every putative pathway between three variables makes a set of differential predictions that can be tested with steady state data. For example, among 3 variables, A, B and C, the coefficient of determination, r(AC)(2) is predicted by the product of r(AB)(2) and r(BC)(2) for some pathways, but not for others. Residuals from a regression line are independent of residuals from another regression for some pathways, but positively or negatively correlated for certain other pathways. Different pathways therefore have different prediction signatures, which can be used to accept or reject plausible pathways using appropriate null hypotheses. The type 2 error reduces with sample size but the nature of this relationship is different for different predictions. We apply these principles to test the classical pathway leading to a hyperinsulinemic normoglycemic insulin-resistant, or pre-diabetic, state using four different sets of epidemiological data. Currently, a set of indices called HOMA-IR and HOMA-beta 3 are used to represent insulin resistance and glucose-stimulated insulin response by beta cells respectively. Our analysis shows that if we assume the HOMA indices to be faithful indicators, the classical pathway must in turn be rejected. In effect, among the populations sampled, the classical pathway and faithfulness of the HOMA indices cannot be simultaneously true. The principles and example shows that it is possible to infer causal pathways from cross sectional correlational data on three or more correlated variables. en_US
dc.language.iso en en_US
dc.publisher Public Library Science en_US
dc.subject OB-OB Mice en_US
dc.subject Insulin-Resistance en_US
dc.subject Risk-Factors en_US
dc.subject Male-Rats en_US
dc.subject Glucose en_US
dc.subject Hyperinsulinemia en_US
dc.subject Hyperglycemia en_US
dc.subject Coefficients en_US
dc.subject Association en_US
dc.subject TOC-OCT-2018 en_US
dc.subject 2018 en_US
dc.title Inferring causal pathways among three or more variables from steady-state correlations in a homeostatic system en_US
dc.type Article en_US
dc.contributor.department Dept. of Biology en_US
dc.identifier.sourcetitle PLOS One en_US
dc.publication.originofpublisher Foreign en_US


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