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Mode-Specific Reorganization Energies and Ultrafast Solvation Dynamics of Tryptophan from Raman Line-Shape Analysis

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dc.contributor.author Milan-Garces, Erix A. en_US
dc.contributor.author Kaptan, Shreyas en_US
dc.contributor.author PURANIK, MRINALINI en_US
dc.date.accessioned 2019-02-14T05:05:04Z
dc.date.available 2019-02-14T05:05:04Z
dc.date.issued 2013-07 en_US
dc.identifier.citation Biophysical Journal, 105(1), 211-221. en_US
dc.identifier.issn Jun-95 en_US
dc.identifier.issn 1542-0086 en_US
dc.identifier.uri http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/1727
dc.identifier.uri https://doi.org/10.1016/j.bpj.2013.04.044 en_US
dc.description.abstract Tryptophan is widely used as an intrinsic fluorophore for studies of protein structure and dynamics. Its fluorescence is known to have two decay components with lifetimes of 0.5 and 3.1 ns. In this work we measure the ultrafast dynamics of Tryptophan at <100 fs through measurements and modeling of the Raman excitation profiles with time-dependent wave packet propagation theory. We use a Brownian oscillator model to simulate the water-tryptophan interaction. Upon photoexcitation to the higher singlet electronic state (Bb) the structure of tryptophan is distorted to an overall expansion of the pyrrole and benzene rings. The total reorganization energy for Trp in water is estimated to be 2169 cm−1 with a 1230 cm−1 contribution from the inertial response of water. The value of reorganization energy of water corresponding to the fast response is found to be higher than that obtained upon excitation to the La state by previous studies that used computational simulations. The long-time dynamics of Trp manifests as a conformational heterogeneity at shorter times and contributes to inhomogeneous broadening of the Raman profiles (315 cm−1). en_US
dc.language.iso en en_US
dc.publisher Elsevier B.V. en_US
dc.subject Mode-Specific Reorganization en_US
dc.subject Ultrafast Solvation Dynamics en_US
dc.subject Tryptophan en_US
dc.subject Raman Line-Shape Analysis en_US
dc.subject Raman excitation profiles en_US
dc.subject 2013 en_US
dc.title Mode-Specific Reorganization Energies and Ultrafast Solvation Dynamics of Tryptophan from Raman Line-Shape Analysis en_US
dc.type Article en_US
dc.contributor.department Dept. of Chemistry en_US
dc.identifier.sourcetitle Biophysical Journal en_US
dc.publication.originofpublisher Foreign en_US


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