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  • BISWAS, ANUSHUA; NARLIKAR, LEELAVATI (Cold Spring Harbor Laboratory Press, 2021-09)
    High-throughput sequencing-based assays measure different biochemical activities pertaining to gene regulation, genome-wide. These activities include transcription factor (TF)–DNA binding, enhancer activity, open chromatin, ...
  • APTE, AMIT (Indian Academy of Sciences, 2022-02)
    The Nobel Prize of 2021 highlighted the importance of understanding the complex dynamical processes that govern the evolution of Earth’s climate. Two of the Nobel laureates, Syukuro Manabe and Klaus Hasselmann pioneered ...
  • Raghav, Mukesh Singh; Jose, Sharath; APTE, AMIT; Govindarajan, Rama (Elsevier B.V., 2022-12)
    Linear modal stability analysis of a mean zonal shear flow is carried out in the framework of rotating shallow water equations (RSWE), both under the -plane approximation and in the full spherical coordinate system. Two ...
  • Vadnala, Rakesh Netha; Hannenhalli, Sridhar; NARLIKAR, LEELAVATI; Siddharthan, Rahul (Elsevier B.V., 2023-08)
    Transcription factors (TFs) and their binding sites have evolved to interact cooperatively or competitively with each other. Here we examine in detail, across multiple cell lines, such cooperation or competition among TFs ...
  • Mandal, Pinak; Roy, Shashank Kumar; APTE, AMIT (Elsevier B.V., 2023-09)
    Using the recently developed Sinkhorn algorithm for approximating the Wasserstein distance between probability distributions represented by Monte Carlo samples, we demonstrate exponential filter stability of two commonly ...
  • Parkhi, Durga; Periyathambi, Nishanthi; Ghebremichael-Weldeselassie, Yonas; Patel, Vinod; Sukumar, Nithya; Siddharthan, Rahul; NARLIKAR, LEELAVATI; Saravanan, Ponnusamy (Elsevier B.V., 2023-10)
    Early onset of type 2 diabetes and cardiovascular disease are common complications for women diagnosed with gestational diabetes. Prediabetes refers to a condition in which blood glucose levels are higher than normal, but ...
  • MAHATA, AJIT; PADHI, REETISH; APTE, AMIT (American Physical Society, 2023-12)
    Study of dynamical systems using partial state observation is an important problem due to its applicability to many real-world systems. We address the problem by studying an echo state network (ESN) framework with partial ...

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