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Liquid-Liquid Phase Separation of Alzheimer's Protein Tau

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dc.contributor.advisor UDGAONKAR, JAYANT en_US
dc.contributor.author GUPTA, NIKITA en_US
dc.date.accessioned 2022-05-17T11:24:47Z
dc.date.available 2022-05-17T11:24:47Z
dc.date.issued 2022-05
dc.identifier.citation 35 en_US
dc.identifier.uri http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/6967
dc.description.abstract Liquid-liquid phase separation (LLPS) is the reversible demixing of a homogenous solution into a dilute phase and a dense phase composed of droplets. These droplets have become increasingly important in understanding cellular biochemistry as membrane-less organelles. Tau, an intrinsically disordered, microtubule-associated protein expressed in neurons, undergoes LLPS in vitro. In Alzheimer’s disease, hyperphosphorylated tau accumulates in ageing neurons as neurofibrillary tangles. Droplets of disease-associated mutants of tau and phosphorylated tau exhibit reduced dynamics with time, transitioning from a normal liquid state to a viscous gel. Interestingly, these droplets also increase the aggregation kinetics of tau. Dynamically arrested droplets are now considered relevant in many neurodegenerative diseases as crucibles for protein aggregation. They may offer an alternative pathway for the assembly of fibrils, non-exclusive from the established nucleation dependent polymerisation. Altered dynamics in droplets could be driven by tau adopting different conformations inside them, and these remain to be elucidated. We intend to use pulsed hydrogen/deuterium exchange mass spectrometry (HXMS) to characterise the structural conformations of full-length tau in vitro droplets. How these conformations change with droplet maturation will shed light on the role of LLPS in tau aggregation. In this study, we isolated full-length tau to ~95% purity and standardised the initiation of LLPS in conditions described previously. We show that a certain concentration of salt abolishes LLPS and requires the presence of a molecular crowder to induce droplet formation. Preliminary FRAP data reveals that droplets are dynamic in nature. Standardised experiments will help estimate the timescale of the exchange of tau molecules between the two phases for the design of HXMS studies. en_US
dc.description.sponsorship KVPY en_US
dc.language.iso en en_US
dc.subject Biophysics en_US
dc.subject Biology en_US
dc.title Liquid-Liquid Phase Separation of Alzheimer's Protein Tau en_US
dc.type Thesis en_US
dc.type.degree BS-MS en_US
dc.contributor.department Dept. of Biology en_US
dc.contributor.registration 20171218 en_US


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  • MS THESES [1713]
    Thesis submitted to IISER Pune in partial fulfilment of the requirements for the BS-MS Dual Degree Programme/MSc. Programme/MS-Exit Programme

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