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Enhancing Cellular Persulfides through Artificial Substrate of 3-Mercaptopyruvate Sulfurtansferase (3-MST)

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dc.contributor.advisor CHAKRAPANI, HARINATH en_US
dc.contributor.author MANNA, SUMAN en_US
dc.date.accessioned 2023-04-19T04:52:53Z
dc.date.available 2023-04-19T04:52:53Z
dc.date.issued 2023-04 en_US
dc.identifier.citation 238 en_US
dc.identifier.uri http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/7700
dc.description.abstract Hydrogen sulfide (H2S) is a major gaseous signalling molecule that is responsible for redox regulation within cells, having implications for primary metabolism, antibiotic response, health, and ageing. 3-Mercaptopyruvate sulfurtransferase (3-MST) is one of the key enzyme involved in the biosynthesis of H2S which occurs through a crucial intermediate step called as 3-MST persulfidation (MST-SSH). Persulfide generated from the 3-MST pathway is essential for regulating mitochondrial activity and transporting sulfur via downstream sulfide transfer to proteins, low molecular weight thiols, and Fe-S clusters. Precise mechanisms by which these effects are mediated by 3-MST remain poorly understood. Also, several studies have shown that dysfunction or dysregulation of 3-MST is linked to various pathophysiological conditions. Hence, the development of a reliable tool is required in order to have better understanding of 3-MST activity as well as 3-MST expression level. In order to understand the biological effects of 3-MST, we hypothesized to modulate the substrate delivery to the enzyme. Owing to the limitations associated with the native substrate (3-mercaptopyruvate), it can not be used reliably to enhance 3-MST activity. In this regard, our lab identified 2-mercapto-1-phenylethan-1-one (PhCOCH2SH) as an artificial substrate for 3-MST that produces H2S/persulfide in cells. Following this, a library of PhCOCH2SH analogues was synthesized to tune the rate of H2S and persulfide production. Structure-activity study with analogues revealed that 3-MST was fairly accommodative of structural modifications. Linear free energy relationship study showed that H2S release rates from para-substituted aryl substrates in the presence of 3-MST had a moderate positive slope supporting a transition state with a no major charge build up. Ortho substituents slowed H2S generation rates likely due to the steric effects and molecular docking studies showed that this substitution pattern reduced access to the active site due to steric clash with certain residues. Next, building on these results, a substrate tethered with a mitochondrial tag at the para-position was synthesized since 3-MST is known to be over-expressed in mitochondria. This compound generated H2S/persulfide in the presence of 3-MST and enhanced H2S levels specifically in mitochondria. Consistent with H2S generation, a perturbation in the mitochondrial membrane potential was observed for the cells treated with the substrate. Lastly, in order to further expand the scope and improve the stability and selectivity of the artificial substrates, enzyme-activated artificial substrates were prepared. A β-glucosidase sensitive donor was synthesized to enhance aqueous solubility and better selectivity. Similarly, esterase-activated compounds were also synthesized to achieve a broad spectrum of applications. Upon activation, both β-glucosidase and esterase activated donors were found to produce H2S/persulfide in the presence of 3-MST. Taken together, a series of artificial substrates for 3-MST were developed as a tool for enhancing persulfidation levels in cells. Hence, therapeutic utilities of these substrates with respect to 3-MST activity can be harnessed and will give a clearer understanding of persulfide biochemistry which was obsolete to date. en_US
dc.language.iso en en_US
dc.subject Cellular persulfides en_US
dc.subject 3-MST en_US
dc.subject Artificial substrate en_US
dc.subject Mitochondria en_US
dc.subject Enzyme trigger en_US
dc.subject Sulfane sulfur en_US
dc.subject Glucosidase en_US
dc.subject Galactosidase en_US
dc.subject Esterase en_US
dc.subject Docking en_US
dc.title Enhancing Cellular Persulfides through Artificial Substrate of 3-Mercaptopyruvate Sulfurtansferase (3-MST) en_US
dc.type Thesis en_US
dc.type Dissertation en_US
dc.description.embargo 1 Year en_US
dc.type.degree Int.Ph.D en_US
dc.contributor.department Dept. of Chemistry en_US
dc.contributor.registration 20162021 en_US


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  • PhD THESES [583]
    Thesis submitted to IISER Pune in partial fulfilment of the requirements for the degree of Doctor of Philosophy

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