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The WDR11 protein as a novel host factor for AAV transduction

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dc.contributor.advisor Rasko, John
dc.contributor.author DESHPANDE, SHIVANI
dc.date.accessioned 2023-05-15T05:45:54Z
dc.date.available 2023-05-15T05:45:54Z
dc.date.issued 2023-05
dc.identifier.citation 81 en_US
dc.identifier.uri http://dr.iiserpune.ac.in:8080/xmlui/handle/123456789/7848
dc.description.abstract Gene therapy has emerged in the last decade as a widely studied and implemented group of unique therapeutic modalities. Though still young and investigational in nature, it has generated significant traction, with many translational technologies making their way to the clinic as licensed treatments for genetic diseases. For in vivo gene therapies, adeno-associated virus (AAV) is among the most widely studied and promising viral vectors, due to its low immunogenicity and diverse tissue tropism. AAV transduction and hence the efficiency of genetic transfer is influenced by host trafficking and processing machinery, through proteins defined as host factors. This study aims at understanding the role played by one such host factor, the WD-repeat family protein WDR11 in AAV transduction. WDR11 was knocked out in different cell lines using CRISPR/Cas9 and these knockout cells were studied for differences in AAV transduction. Genomic knockout of WDR11 increased AAV transduction by 1.5 fold in HeLa cells, and 3-3.5 fold in eHAP cells, an effect that was reversed by ectopic overexpression of WDR11 in knockout cells. This study also showed that WDR11 KO increases the cell surface expression of AAVR, a receptor shown to be critical for transduction by multiple AAV serotypes. It is hence possible that WDR11 KO causes leads to increased localisation of AAVR at the cell surface, and together assisted by compensatory pathways leads to increased AAV trafficking in the cell. Overall, this study aims to study WDR11 as a potential restriction factor to gain a deeper understanding of AAV biology. en_US
dc.language.iso en en_US
dc.subject gene therapy en_US
dc.subject vesicle trafficking en_US
dc.subject intracellular trafficking en_US
dc.subject host factors en_US
dc.subject viral gene therapy en_US
dc.subject viral gene vehicles en_US
dc.subject adeno-associated virus en_US
dc.title The WDR11 protein as a novel host factor for AAV transduction en_US
dc.type Image en_US
dc.type Thesis en_US
dc.description.embargo Two Years en_US
dc.type.degree BS-MS en_US
dc.contributor.department Dept. of Biology en_US
dc.contributor.registration 20181199 en_US


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  • MS THESES [1705]
    Thesis submitted to IISER Pune in partial fulfilment of the requirements for the BS-MS Dual Degree Programme/MSc. Programme/MS-Exit Programme

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